Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_144295621_144296672_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144295621 - 144296672

Intron Length:

1052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TCCTCTTCTACA

Flanking Amino Acid:

LNFINVVGSVCGAQTLMSGS

Intron Amino Acid Position:

631

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

84.8

0.78

0.7

79.4

26.2

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

50.4

0.01

1.9

43.4

Associated Gene:

Gene:

SUPT20H

Ensembl Gene ID:

ENSAPLG00000007566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031846

144287544 - 144321697

34154

ENSAPLT00000022326

144287544 - 144321697

34154

ENSAPLT00000007873

144287544 - 144321697

34154