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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144678075_144679772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144678075 - 144679772

Intron Length:

1698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

TTTTTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

TTTTTGTTCACA

Flanking Amino Acid:

MMNNSYQLIADHADIEWKFA

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.3

39.3

Major BPS

0.42

1.1

38.5

Major PPT

0.85

0.7

83.5

31.6

Minor 5ss

42.5

-0.8

2.8

59.1

45.4

Minor BPS

55.5

0.17

2.4

78.35

38.8

Associated Gene:

Gene:

TRPC4

Ensembl Gene ID:

ENSAPLG00000005816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006029

144664111 - 144821063

156953