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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144681188_144687191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144681188 - 144687191

Intron Length:

6004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AGTGAAATAATT

Flanking Amino Acid:

ISLKIVAYSKYNATVPRQNW

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

43.8

-0.3

62.68

40.9

Associated Gene:

Gene:

TRPC4

Ensembl Gene ID:

ENSAPLG00000005816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006029

144664111 - 144821063

156953