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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144687332_144702056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144687332 - 144702056

Intron Length:

14725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATGTA

5'SS Class:

major

3'SS Sequence:

GTTCTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCATGCTTAATG

Flanking Amino Acid:

VEWMILPWVLGFIWGEIKQM

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

74.8

35.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

82.5

0.73

0.9

75.8

38.2

Minor 5ss

35.2

-1.7

3.4

40.2

Minor BPS

61.1

0.21

1.9

63.75

44.6

Associated Gene:

Gene:

TRPC4

Ensembl Gene ID:

ENSAPLG00000005816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006029

144664111 - 144821063

156953