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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144728566_144757746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144728566 - 144757746

Intron Length:

29181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTTTTTTATAG

Flanking Amino Acid:

NHKKPSGEKQVPPILLDKQF

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.6

31.9

Major BPS

73.8

0.59

1.3

72.8

Major PPT

88.2

0.86

0.7

84.2

30.9

Minor 5ss

43.1

-0.8

2.4

55.1

42.2

Minor BPS

58.2

0.12

1.7

67.78

40.2

Associated Gene:

Gene:

TRPC4

Ensembl Gene ID:

ENSAPLG00000005816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006029

144664111 - 144821063

156953