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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144758152_144820622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

144758152 - 144820622

Intron Length:

62471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCATATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTCATATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

100

1.24

0.5

100

Major PPT

84.6

0.78

0.8

81.9

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

0.21

1.9

41.3

Associated Gene:

Gene:

TRPC4

Ensembl Gene ID:

ENSAPLG00000005816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006029

144664111 - 144821063

156953