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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145009262_145010851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145009262 - 145010851

Intron Length:

1590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTGCTCCATG

Flanking Amino Acid:

VFGGMNLTRDELEWKISESG

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

77.5

30.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

75.8

0.58

0.9

70.4

35.3

Minor 5ss

31.9

-2.1

3.3

40.3

40.2

Minor BPS

46.8

-0.4

2.4

63.16

45.2

Associated Gene:

Gene:

PDCL3

Ensembl Gene ID:

ENSAPLG00000016296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017004

145008792 - 145014365

5574