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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145012900_145013499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145012900 - 145013499

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCATTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TTTTGCTGATTT

Flanking Amino Acid:

EQLMILQKSLVKTYEDMTLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

72.1

0.5

0.9

38.3

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

53.9

0.2

2.1

80.66

41.5

Associated Gene:

Gene:

PDCL3

Ensembl Gene ID:

ENSAPLG00000016296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017004

145008792 - 145014365

5574