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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145013630_145014359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145013630 - 145014359

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAG

U12 Branch Point Sequence:

TGTTTCTTGTTT

Flanking Amino Acid:

MQDPDKDTEWND

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

59.9

0.25

1.6

59.3

47.1

Major PPT

85.5

0.8

0.7

81.4

30.6

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

46.8

-0.1

3.4

78.89

37.8

Associated Gene:

Gene:

PDCL3

Ensembl Gene ID:

ENSAPLG00000016296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017004

145008792 - 145014365

5574