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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145065940_145067413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145065940 - 145067413

Intron Length:

1474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCAAT

U12 Branch Point Sequence:

TTTTTCTTTCTT

Flanking Amino Acid:

SSFSDSEIQKRLNLYFKFFI

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.9

36.6

Major BPS

68.1

0.45

1.3

76.8

34.3

Major PPT

77.2

0.61

0.8

76.9

31.8

Minor 5ss

33.6

-1.9

3.5

49.7

46.1

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

CHST10

Ensembl Gene ID:

ENSAPLG00000016175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029148

145059945 - 145068814

8870

ENSAPLT00000016872

145056578 - 145067951

11374

ENSAPLT00000046768

145057306 - 145068814

11509