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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145091254_145105607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145091254 - 145105607

Intron Length:

14354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCGC

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTTCTTGTAACC

Flanking Amino Acid:

LEKYNEALEMAPCKCSLIAQ

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

54.1

45.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

0.9

0.7

84.9

29.9

Minor 5ss

32.3

-2

33.6

41.9

Minor BPS

51.4

0.02

66.58

39.6

Associated Gene:

Gene:

LONRF2

Ensembl Gene ID:

ENSAPLG00000016120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016829

145090437 - 145120730

30294

ENSAPLT00000020486

145090437 - 145120388

29952