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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145110325_145110789_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145110325 - 145110789

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

CTGTTCTCAATT

Flanking Amino Acid:

EDSSIAGSSKDTVFRLTKNP

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

86.2

0.81

0.7

85.3

28.6

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

0.49

1.6

75.27

42.3

Associated Gene:

Gene:

LONRF2

Ensembl Gene ID:

ENSAPLG00000016120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020486

145090437 - 145120388

29952

ENSAPLT00000016829

145090437 - 145120730

30294