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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145113118_145113477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145113118 - 145113477

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCGTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAT

U12 Branch Point Sequence:

TTTTGTTCCATG

Flanking Amino Acid:

ASDFECSLCMRLFYEPVTTP

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

66.8

0.42

1.1

64.4

41.8

Major PPT

81.3

0.7

0.9

76.8

37.3

Minor 5ss

40.4

-1.1

3.3

55.6

48.6

Minor BPS

44.4

-0.5

2.3

58.73

Associated Gene:

Gene:

LONRF2

Ensembl Gene ID:

ENSAPLG00000016120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020486

145090437 - 145120388

29952

ENSAPLT00000016829

145090437 - 145120730

30294