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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145113593_145114246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145113593 - 145114246

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GACTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

CTTCTCGTAATC

Flanking Amino Acid:

CPLCKEKLSEFLASRTYKKT

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

0.47

69.9

32.6

Major PPT

82.1

0.72

0.9

76.5

37.2

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

52.7

0.06

66.76

39.6

Associated Gene:

Gene:

LONRF2

Ensembl Gene ID:

ENSAPLG00000016120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020486

145090437 - 145120388

29952

ENSAPLT00000016829

145090437 - 145120730

30294