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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145118109_145120064_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

145118109 - 145120064

Intron Length:

1956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATCTAT

5'SS Class:

major

3'SS Sequence:

TCTTAACAATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

CTTCTCTTAACA

Flanking Amino Acid:

ANIEYLEDKKVEGPEYEELV

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

72.9

34.3

Major BPS

77.1

0.67

77.9

32.2

Major PPT

54.9

0.11

1.2

59.2

Minor 5ss

40.1

-1.1

3.1

55.5

48.6

Minor BPS

77.1

0.85

1.2

80.35

35.4

Associated Gene:

Gene:

LONRF2

Ensembl Gene ID:

ENSAPLG00000016120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020486

145090437 - 145120388

29952

ENSAPLT00000016829

145090437 - 145120730

30294