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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145235182_145327459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145235182 - 145327459

Intron Length:

92278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTTTCTCATTT

Flanking Amino Acid:

AKFSIPKQEEDSGTGDNSCI

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.4

0.82

0.8

80.4

36.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

55.4

0.25

1.8

75.31

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016776

145228526 - 145370010

141485