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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14527791_14528435_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14527791 - 14528435

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTACATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GTGATTTTACAT

Flanking Amino Acid:

DELAIQGKLPDPVKEYGCAP

Intron Amino Acid Position:

2100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

41.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

81.2

0.7

0.8

79.1

33.8

Minor 5ss

49.9

-0

2.8

73.5

43.2

Minor BPS

47.2

-0.1

1.7

61.86

42.2

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269