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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14528607_14529417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14528607 - 14529417

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GATTTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGAATCATAATA

Flanking Amino Acid:

MGIKTSEGTPGFRAPEVARG

Intron Amino Acid Position:

2043

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

74.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

80.6

0.69

0.9

40.3

Minor 5ss

30.2

-2.3

3.3

38.5

46.8

Minor BPS

52.3

0.07

1.6

62.67

37.1

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269