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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14530441_14530617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14530441 - 14530617

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTACAATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GATTTTACAATT

Flanking Amino Acid:

KHTSLRLLRQELAVLCHLHH

Intron Amino Acid Position:

1926

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.1

29.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

76.7

0.6

0.9

69.4

40.3

Minor 5ss

31.5

-2.1

3.4

38.4

40.9

Minor BPS

48.2

-0

1.7

66.75

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269