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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14534605_14535304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14534605 - 14535304

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGGAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAC

U12 Branch Point Sequence:

TTTTTTTGGAAA

Flanking Amino Acid:

PKWLCKIMAQILTVKMEGFS

Intron Amino Acid Position:

1616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

77.3

37.8

Major BPS

60.3

0.26

1.1

68.9

36.5

Major PPT

69.4

0.44

1.2

74.5

39.3

Minor 5ss

35.1

-1.7

2.8

42.9

Minor BPS

55.8

0.18

1.6

71.39

34.2

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269