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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14541488_14541891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14541488 - 14541891

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGATTTTATTT

Flanking Amino Acid:

LHLSHNKLKEIPPQIGFLEN

Intron Amino Acid Position:

1266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

0.23

1.6

71.47

40.5

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269