Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14542079_14545243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14542079 - 14545243

Intron Length:

3165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TTCATGTCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CATTTTCTAACT

Flanking Amino Acid:

NVPETILLLPHLRSVDLSQN

Intron Amino Acid Position:

1203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.3

32.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

75.9

0.58

0.9

73.6

36.9

Minor 5ss

41.7

-0.9

2.8

54.7

43.6

Minor BPS

61.2

0.43

1.7

77.11

39.5

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269