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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14545338_14546561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14545338 - 14546561

Intron Length:

1224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TCTTTTTCTATT

Flanking Amino Acid:

ELFNARMNALEIMPDLSSSI

Intron Amino Acid Position:

1172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

27.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

89.3

0.88

0.7

81.9

34.4

Minor 5ss

40.4

-1.1

2.8

51.7

39.2

Minor BPS

49.5

0.05

1.8

70.82

40.9

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269