Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14546711_14548014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14546711 - 14548014

Intron Length:

1304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGAGTA

5'SS Class:

major

3'SS Sequence:

TTTGTTACCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

AENLEQLLLEGNKISCICSP

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

71.2

34.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.1

0.66

0.9

73.7

35.7

Minor 5ss

28.1

-2.5

3.3

29.9

43.1

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269