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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145472303_145474505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145472303 - 145474505

Intron Length:

2203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

AATTCCTCAATG

Flanking Amino Acid:

QSQPHPGDFNKAIHINSENV

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

86.1

24.6

Major BPS

73.1

0.58

73.8

32.3

Major PPT

73.1

0.52

65.8

45.3

Minor 5ss

46.2

-0.4

2.8

62.8

Minor BPS

0.37

1.6

67.69

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029429

145461554 - 145499079

37526

ENSAPLT00000016773

145456235 - 145499079

42845