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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14548266_14548772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14548266 - 14548772

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAATTCTG

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTGAAAC

Flanking Amino Acid:

LTNIPEQLCENLKCLNYLDL

Intron Amino Acid Position:

1039

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.3

42.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

39.6

-1.2

50.7

39.8

Minor BPS

64.6

0.44

1.5

76.07

33.6

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013078

14514400 - 14584668

70269

ENSAPLT00000042677

14516850 - 14584668

67819