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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145486883_145489560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145486883 - 145489560

Intron Length:

2678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

GTGTCCTTATTT

Flanking Amino Acid:

KRKKHKADAMVEKFGKALNY

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

72.2

32.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

85.6

0.8

0.6

78.7

30.2

Minor 5ss

28.5

-2.5

2.7

29.8

36.4

Minor BPS

68.9

0.67

1.6

80.59

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029429

145461554 - 145499079

37526

ENSAPLT00000016773

145456235 - 145499079

42845