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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145489698_145491785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145489698 - 145491785

Intron Length:

2088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

TCTCAGTTAACT

Flanking Amino Acid:

TMYSETVELIRYAVRLKTHS

Intron Amino Acid Position:

654

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

66.4

45.1

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

69.3

0.43

1.1

67.3

38.3

Minor 5ss

31.5

-2.1

3.1

39.9

45.7

Minor BPS

55.1

0.24

2.2

78.43

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029429

145461554 - 145499079

37526

ENSAPLT00000016773

145456235 - 145499079

42845