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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145497231_145497359_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145497231 - 145497359

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CATCTGATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ATCCTCTTAACT

Flanking Amino Acid:

QNPSPWGTSGKSTGTPSPMS

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

77.9

0.69

0.8

75.9

Major PPT

74.3

0.55

0.9

69.9

39.9

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

75.3

0.87

1.2

83.49

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029429

145461554 - 145499079

37526

ENSAPLT00000016773

145456235 - 145499079

42845