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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145497575_145498957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145497575 - 145498957

Intron Length:

1383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ACTCTTTTGATG

Flanking Amino Acid:

MADNLAKENRDFFNDLDALM

Intron Amino Acid Position:

798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.6

0.73

0.7

78.1

23.8

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

51.6

-0.1

1.3

52.76

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029429

145461554 - 145499079

37526

ENSAPLT00000016773

145456235 - 145499079

42845