Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14554647_14555985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14554647 - 14555985

Intron Length:

1339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGTGTT

5'SS Class:

major

3'SS Sequence:

GTTATGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CTTTCGTTATGT

Flanking Amino Acid:

FKEVTEIQMHGFHAILSILS

Intron Amino Acid Position:

653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

32.9

Major BPS

73.1

0.58

79.6

29.1

Major PPT

75.6

0.58

0.9

69.6

41.4

Minor 5ss

47.1

-0.3

3.2

70.8

39.9

Minor BPS

48.4

-0

2.5

75.16

47.6

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269