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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145558073_145559098_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
145558073 - 145559098

Intron Length:
1026

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTAAA

5'SS Class:
strong_major

3'SS Sequence:
TATTAATTTTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATTAATT

Flanking Amino Acid:
AEIASCSYEARQVGIKNGMF

Intron Amino Acid Position:
528

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88
0.89
0.9
83.2
30.8

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
77.7
0.62
0.9
74.9
39.4

Minor 5ss
33.6
-1.9
3
41.3
45.3

Minor BPS
76.9
0.92
1.4
92.73
28.9

Associated Gene:

Gene:
REV1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145537421 - 145580242
42822

145537421 - 145580242
42822

145537421 - 145580242
42822