Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_145569424_145569729_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145569424 - 145569729

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCATATGTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTTTTTCATA

Flanking Amino Acid:

KKCSEEEHKEVFVAAMDLEI

Intron Amino Acid Position:

881

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.9

38.6

Major BPS

100

1.24

0.5

100

Major PPT

74.5

0.55

68.8

Minor 5ss

30.5

-2.2

2.5

33.4

41.8

Minor BPS

58.5

0.26

1.7

69.67

37.9

Associated Gene:

Gene:

REV1

Ensembl Gene ID:

ENSAPLG00000015629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036030

145537421 - 145580242

42822

ENSAPLT00000029780

145537421 - 145580242

42822

ENSAPLT00000016376

145537421 - 145580242

42822