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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145619952_145621136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

145619952 - 145621136

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTACATGTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

80.5

0.69

0.8

75.1

33.3

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

45.9

-0.2

2.2

68.73

41.6

Associated Gene:

Gene:

TXNDC9

Ensembl Gene ID:

ENSAPLG00000015346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015993

145619292 - 145628331

9040

ENSAPLT00000028588

145619292 - 145628331

9040