Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_145649333_145649570_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145649333 - 145649570

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ACAACCTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAC

U12 Branch Point Sequence:

CTCCACACAACC

Flanking Amino Acid:

LVLLGLAALLGACQGRTDCY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

74.1

38.3

Major BPS

55.2

0.13

1.1

62.9

34.3

Major PPT

70.8

0.47

0.9

39.9

Minor 5ss

33.1

-1.9

2.8

32.9

41.9

Minor BPS

43.9

-0.4

1.9

54.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015813

145649259 - 145652135

2877