Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_145663732_145663875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145663732 - 145663875

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGGTC

5'SS Class:

major

3'SS Sequence:

TTTGGCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCGAC

U12 Branch Point Sequence:

GGGCACCGACCC

Flanking Amino Acid:

GIDLLLQVVKGTKDEAKKQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.2

64.6

41.6

Major BPS

45.5

-0.2

1.1

39.5

31.1

Major PPT

78.8

0.65

0.9

37.3

Minor 5ss

38.3

-1.3

3.8

58.4

46.5

Minor BPS

36.2

-1

1.9

40.65

37.8

Associated Gene:

Gene:

MITD1

Ensembl Gene ID:

ENSAPLG00000014881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015514

145663578 - 145665759

2182