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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14566854_14569715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14566854 - 14569715

Intron Length:

2862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TATCTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTCATTTAATA

Flanking Amino Acid:

CCCLLHKLTLGNFFNILVLH

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.7

33.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

84.4

0.77

0.8

81.6

34.6

Minor 5ss

-1.1

2.7

42.4

44.3

Minor BPS

64.1

0.44

1.4

72.27

33.1

Associated Gene:

Gene:

LRRK2

Ensembl Gene ID:

ENSAPLG00000012447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042677

14516850 - 14584668

67819

ENSAPLT00000013078

14514400 - 14584668

70269