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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145735802_145738192_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
145735802 - 145738192

Intron Length:
2391

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTAAGTCTT

5'SS Class:
major

3'SS Sequence:
TGTGTTATTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGTTAT

U12 Branch Point Sequence:
GCTGTGTTATTC

Flanking Amino Acid:
HVSYYSEDEVESHKGVMGSR

Intron Amino Acid Position:
77

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1
75.5
40.6

Major BPS
63.6
0.34
1.4
57.4
49.1

Major PPT
75.2
0.57
0.9
67
43.8

Minor 5ss
41.4
-1
3.1
55.9
42.3

Minor BPS
42
-0.6
2.2
49.49
41.9

Associated Gene:

Gene:
KIAA1211L

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145734609 - 145756998
22390

145723901 - 145756998
33098