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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145756036_145756849_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
145756036 - 145756849

Intron Length:
814

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTAGGAAAG

5'SS Class:
major

3'SS Sequence:
GTTTTATTCACAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTTTTAT

U12 Branch Point Sequence:
GTTTTATTCACA

Flanking Amino Acid:
RTNSLSHFVPVAQSPALTDK

Intron Amino Acid Position:
923

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.3
0.53
1.1
62.9
43.3

Major BPS
78.7
0.71
1.2
71.7
44.6

Major PPT
82.3
0.73
0.8
76.6
36.5

Minor 5ss
31.9
-2.1
3.2
40.4
45.5

Minor BPS
55.5
0.17
2
72.91
38.8

Associated Gene:

Gene:
KIAA1211L

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145734609 - 145756998
22390

145723901 - 145756998
33098