Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_145813218_145813810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145813218 - 145813810

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AATTGAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATCCTTAAGT

Flanking Amino Acid:

ETFGDSKERVRWRTKQNLDY

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

85.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.9

0.45

64.3

45.2

Minor 5ss

40.1

-1.1

2.7

50.2

Minor BPS

80.8

1.05

1.5

93.01

35.4

Associated Gene:

Gene:

MGAT4A

Ensembl Gene ID:

ENSAPLG00000014270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014941

145773582 - 145838812

65231

ENSAPLT00000021703

145773582 - 145838939

65358