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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145849822_145849928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145849822 - 145849928

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCGCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAA

U12 Branch Point Sequence:

AAGGCAATAACC

Flanking Amino Acid:

CLLESPCVLQENKSPKQCLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

54.7

0.12

1.2

56.1

37.3

Major PPT

65.8

0.36

59.1

37.1

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

46.6

-0.2

1.9

56.43

41.4

Associated Gene:

Gene:

COA5

Ensembl Gene ID:

ENSAPLG00000025469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036642

145849720 - 145852088

2369