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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145852210_145916756_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
145852210 - 145916756

Intron Length:
64547

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATCTACT

5'SS Class:
major

3'SS Sequence:
TGTTCATTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
TTTTGTTCATTT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.4
0.62
1.1
77.1
37.8

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
78.6
0.64
0.9
70.5
40.2

Minor 5ss
50.1
0.01
2.2
70
40.2

Minor BPS
48.7
-0
2.1
75.55
42.1

Associated Gene:

Gene:
INPP4A

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145852047 - 145966818
114772

145852047 - 145966818
114772