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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145919493_145920312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145919493 - 145920312

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

CTTTGCTAACCT

Flanking Amino Acid:

TSDMVGLSLAGNIQDPDEPI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

35.1

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

86.1

0.81

0.9

79.9

37.7

Minor 5ss

35.9

-1.6

2.9

46.6

41.7

Minor BPS

48.8

-0

2.3

47.8

Associated Gene:

Gene:

INPP4A

Ensembl Gene ID:

ENSAPLG00000006583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022176

145916757 - 145966818

50062

ENSAPLT00000006845

145852047 - 145966818

114772

ENSAPLT00000006841

145852047 - 145966818

114772