Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_145941676_145944997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145941676 - 145944997

Intron Length:

3322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCGTG

5'SS Class:

major

3'SS Sequence:

CATTTCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

GCTCCTTAATCA

Flanking Amino Acid:

QCDISCTSKKDCSPAPEESG

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

42.1

Major BPS

80.4

0.76

80.3

31.8

Major PPT

0.63

0.9

36.9

Minor 5ss

-1.1

3.4

55.5

48.6

Minor BPS

46.9

-0.2

1.9

56.99

42.6

Associated Gene:

Gene:

INPP4A

Ensembl Gene ID:

ENSAPLG00000006583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006841

145852047 - 145966818

114772

ENSAPLT00000006845

145852047 - 145966818

114772