Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_145949315_145950701_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145949315 - 145950701

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

TTCTCTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

TTCTCTCCCACA

Flanking Amino Acid:

YRRDVVFCQTLTALICGFII

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.2

62.2

43.9

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

81.5

0.71

0.7

76.3

25.9

Minor 5ss

41.6

-0.9

2.9

58.6

45.6

Minor BPS

45.6

-0.3

2.2

63.87

42.8

Associated Gene:

Gene:

INPP4A

Ensembl Gene ID:

ENSAPLG00000006583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022176

145916757 - 145966818

50062

ENSAPLT00000006845

145852047 - 145966818

114772

ENSAPLT00000006841

145852047 - 145966818

114772