Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_145987354_145990733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145987354 - 145990733

Intron Length:

3380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTACTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TTGTCTTTACTG

Flanking Amino Acid:

SSSSPTHTTASILGNPSGLW

Intron Amino Acid Position:

1855

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

79.8

0.67

0.9

74.1

35.3

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

62.2

0.24

1.7

66.43

42.4

Associated Gene:

Gene:

TMEM131

Ensembl Gene ID:

ENSAPLG00000015123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015859

145987060 - 146083202

96143