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Intron Name: Anas_platyrhynchos_platyrhynchos_1_145992292_145993377_R


Intron Information:

Intron Rank:
38

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
145992292 - 145993377

Intron Length:
1086

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACTTTT

5'SS Class:
strong_major

3'SS Sequence:
CCTTAATATTTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAATAT

U12 Branch Point Sequence:
TACTCCTTAATA

Flanking Amino Acid:
HAVVDSDGSDSSGLWSPISN

Intron Amino Acid Position:
1767

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.6
0.84
1.1
87.9
29.3

Major BPS
67.5
0.44
1.1
63.7
42.3

Major PPT
69.3
0.44
0.9
66.8
38.4

Minor 5ss
55.9
0.2
2.5
76
39.7

Minor BPS
81.4
0.98
1.1
80.47
35.5

Associated Gene:

Gene:
TMEM131

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145987060 - 146083202
96143