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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146003573_146006299_R


Intron Information:

Intron Rank:
29

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
146003573 - 146006299

Intron Length:
2727

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGTGTGT

5'SS Class:
major

3'SS Sequence:
CTCTACTCCGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTTAA

U12 Branch Point Sequence:
AAATACTTAAAT

Flanking Amino Acid:
ALYILTSGIMSVLFLLVIGT

Intron Amino Acid Position:
1186

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70
0.47
1.1
63.2
43.6

Major BPS
74.4
0.61
0.9
63.9
34.9

Major PPT
74.8
0.56
0.8
69
31.1

Minor 5ss
37.1
-1.5
3.6
56
48.2

Minor BPS
63.3
0.5
1.6
75.7
39.7

Associated Gene:

Gene:
TMEM131

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145987060 - 146083202
96143