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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146013685_146013828_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
146013685 - 146013828

Intron Length:
144

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTGCT

5'SS Class:
major

3'SS Sequence:
ACCTGTTTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAT

U12 Branch Point Sequence:
AGTTTCTTAATT

Flanking Amino Acid:
EDLEPGKKSKIANIYFDPGL

Intron Amino Acid Position:
794

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.61
1.1
72.6
36.5

Major BPS
87
0.92
0.9
86.2
29.1

Major PPT
78.7
0.65
0.9
72.4
37.1

Minor 5ss
37.8
-1.4
3
51.1
45.4

Minor BPS
79.8
1.01
1
86.81
32.4

Associated Gene:

Gene:
TMEM131

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145987060 - 146083202
96143