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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146020054_146020496_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
146020054 - 146020496

Intron Length:
443

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAAGTAAT

5'SS Class:
major

3'SS Sequence:
CTGCCATTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATGAA

U12 Branch Point Sequence:
TTTTCTGCCATT

Flanking Amino Acid:
QNATASDQSSVILTSGYYAV

Intron Amino Acid Position:
679

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
81.1
32.8

Major BPS
67.7
0.44
1
58
38.9

Major PPT
75.8
0.58
0.9
68.5
36.3

Minor 5ss
39.6
-1.2
2.9
57
41.2

Minor BPS
45.8
-0.2
2.5
75.4
42.3

Associated Gene:

Gene:
TMEM131

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145987060 - 146083202
96143